PoplarV1, Main, Exploration, bibRecord, 003359

Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park.

Identifieur interne : 003359 ( Main/Exploration ); précédent : 003358; suivant : 003360

Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park.

Auteurs : Scott D. Hamilton-Brehm [États-Unis] ; Jennifer J. Mosher ; Tatiana Vishnivetskaya ; Mircea Podar ; Sue Carroll ; Steve Allman ; Tommy J. Phelps ; Martin Keller ; James G. Elkins

Source :

Applied and environmental microbiology [ 1098-5336 ] ; 2010.

RBID : pubmed:20023107

Descripteurs français

KwdFr :
- ADN bactérien (composition chimique), ADN bactérien (génétique), ARN bactérien (génétique), ARN ribosomique 16S (génétique), Bactéries anaérobies (classification), Bactéries anaérobies (génétique), Bactéries anaérobies (isolement et purification), Bactéries anaérobies (métabolisme), Cellobiose (métabolisme), Composition en bases nucléiques (MeSH), Données de séquences moléculaires (MeSH), Fermentation (MeSH), Gènes bactériens (MeSH), Microbiologie de l'eau (MeSH), Microscopie électronique à balayage (MeSH), Phylogenèse (MeSH), Phénotype (MeSH), Séquence nucléotidique (MeSH), Température élevée (MeSH), Wyoming (MeSH).
MESH :
- composition chimique : ADN bactérien, Bactéries anaérobies.
- génétique : ADN bactérien, ARN bactérien, ARN ribosomique 16S, Bactéries anaérobies.
- isolement et purification : Bactéries anaérobies.
- métabolisme : Bactéries anaérobies, Cellobiose.
- Composition en bases nucléiques, Données de séquences moléculaires, Fermentation, Gènes bactériens, Microbiologie de l'eau, Microscopie électronique à balayage, Phylogenèse, Phénotype, Séquence nucléotidique, Température élevée, Wyoming.

English descriptors

KwdEn :
- Bacteria, Anaerobic (classification), Bacteria, Anaerobic (genetics), Bacteria, Anaerobic (isolation & purification), Bacteria, Anaerobic (metabolism), Base Composition (MeSH), Base Sequence (MeSH), Cellobiose (metabolism), DNA, Bacterial (chemistry), DNA, Bacterial (genetics), Fermentation (MeSH), Genes, Bacterial (MeSH), Hot Temperature (MeSH), Microscopy, Electron, Scanning (MeSH), Molecular Sequence Data (MeSH), Phenotype (MeSH), Phylogeny (MeSH), RNA, Bacterial (genetics), RNA, Ribosomal, 16S (genetics), Water Microbiology (MeSH), Wyoming (MeSH).
MESH :
- chemical , chemistry : DNA, Bacterial.
- chemical , genetics : DNA, Bacterial, RNA, Bacterial, RNA, Ribosomal, 16S.
- chemical , metabolism : Cellobiose.
- geographic : Wyoming.
- classification : Bacteria, Anaerobic.
- genetics : Bacteria, Anaerobic.
- isolation & purification : Bacteria, Anaerobic.
- metabolism : Bacteria, Anaerobic.
- Base Composition, Base Sequence, Fermentation, Genes, Bacterial, Hot Temperature, Microscopy, Electron, Scanning, Molecular Sequence Data, Phenotype, Phylogeny, Water Microbiology.

Abstract

A novel, obligately anaerobic, extremely thermophilic, cellulolytic bacterium, designated OB47(T), was isolated from Obsidian Pool, Yellowstone National Park, WY. The isolate was a nonmotile, non-spore-forming, Gram-positive rod approximately 2 microm long by 0.2 microm wide and grew at temperatures between 55 and 85 degrees C, with the optimum at 78 degrees C. The pH range for growth was 6.0 to 8.0, with values of near 7.0 being optimal. Growth on cellobiose produced the fastest specific growth rate at 0.75 h(-1). The organism also displayed fermentative growth on glucose, maltose, arabinose, fructose, starch, lactose, mannose, sucrose, galactose, xylose, arabinogalactan, Avicel, xylan, filter paper, processed cardboard, pectin, dilute acid-pretreated switchgrass, and Populus. OB47(T) was unable to grow on mannitol, fucose, lignin, Gelrite, acetate, glycerol, ribose, sorbitol, carboxymethylcellulose, and casein. Yeast extract stimulated growth, and thiosulfate, sulfate, nitrate, and sulfur were not reduced. Fermentation end products were mainly acetate, H2, and CO2, although lactate and ethanol were produced in 5-liter batch fermentations. The G+C content of the DNA was 35 mol%, and sequence analysis of the small subunit rRNA gene placed OB47(T) within the genus Caldicellulosiruptor. Based on its phylogenetic and phenotypic properties, the isolate is proposed to be designated Caldicellulosiruptor obsidiansis sp. nov. and OB47 is the type strain (ATCC BAA-2073).

DOI: 10.1128/AEM.01903-09
PubMed: 20023107
PubMed Central: PMC2820981

Affiliations:

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<term>Bacteria, Anaerobic (metabolism)</term>
<term>Base Composition (MeSH)</term>
<term>Base Sequence (MeSH)</term>
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<term>DNA, Bacterial (chemistry)</term>
<term>DNA, Bacterial (genetics)</term>
<term>Fermentation (MeSH)</term>
<term>Genes, Bacterial (MeSH)</term>
<term>Hot Temperature (MeSH)</term>
<term>Microscopy, Electron, Scanning (MeSH)</term>
<term>Molecular Sequence Data (MeSH)</term>
<term>Phenotype (MeSH)</term>
<term>Phylogeny (MeSH)</term>
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<term>Water Microbiology (MeSH)</term>
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<term>Bactéries anaérobies (génétique)</term>
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<term>Composition en bases nucléiques (MeSH)</term>
<term>Données de séquences moléculaires (MeSH)</term>
<term>Fermentation (MeSH)</term>
<term>Gènes bactériens (MeSH)</term>
<term>Microbiologie de l'eau (MeSH)</term>
<term>Microscopie électronique à balayage (MeSH)</term>
<term>Phylogenèse (MeSH)</term>
<term>Phénotype (MeSH)</term>
<term>Séquence nucléotidique (MeSH)</term>
<term>Température élevée (MeSH)</term>
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<term>Bactéries anaérobies</term>
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<term>Hot Temperature</term>
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<term>Gènes bactériens</term>
<term>Microbiologie de l'eau</term>
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<front><div type="abstract" xml:lang="en">A novel, obligately anaerobic, extremely thermophilic, cellulolytic bacterium, designated OB47(T), was isolated from Obsidian Pool, Yellowstone National Park, WY. The isolate was a nonmotile, non-spore-forming, Gram-positive rod approximately 2 microm long by 0.2 microm wide and grew at temperatures between 55 and 85 degrees C, with the optimum at 78 degrees C. The pH range for growth was 6.0 to 8.0, with values of near 7.0 being optimal. Growth on cellobiose produced the fastest specific growth rate at 0.75 h(-1). The organism also displayed fermentative growth on glucose, maltose, arabinose, fructose, starch, lactose, mannose, sucrose, galactose, xylose, arabinogalactan, Avicel, xylan, filter paper, processed cardboard, pectin, dilute acid-pretreated switchgrass, and Populus. OB47(T) was unable to grow on mannitol, fucose, lignin, Gelrite, acetate, glycerol, ribose, sorbitol, carboxymethylcellulose, and casein. Yeast extract stimulated growth, and thiosulfate, sulfate, nitrate, and sulfur were not reduced. Fermentation end products were mainly acetate, H2, and CO2, although lactate and ethanol were produced in 5-liter batch fermentations. The G+C content of the DNA was 35 mol%, and sequence analysis of the small subunit rRNA gene placed OB47(T) within the genus Caldicellulosiruptor. Based on its phylogenetic and phenotypic properties, the isolate is proposed to be designated Caldicellulosiruptor obsidiansis sp. nov. and OB47 is the type strain (ATCC BAA-2073).</div>
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<Title>Applied and environmental microbiology</Title>
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<ArticleTitle>Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park.</ArticleTitle>
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<Abstract><AbstractText>A novel, obligately anaerobic, extremely thermophilic, cellulolytic bacterium, designated OB47(T), was isolated from Obsidian Pool, Yellowstone National Park, WY. The isolate was a nonmotile, non-spore-forming, Gram-positive rod approximately 2 microm long by 0.2 microm wide and grew at temperatures between 55 and 85 degrees C, with the optimum at 78 degrees C. The pH range for growth was 6.0 to 8.0, with values of near 7.0 being optimal. Growth on cellobiose produced the fastest specific growth rate at 0.75 h(-1). The organism also displayed fermentative growth on glucose, maltose, arabinose, fructose, starch, lactose, mannose, sucrose, galactose, xylose, arabinogalactan, Avicel, xylan, filter paper, processed cardboard, pectin, dilute acid-pretreated switchgrass, and Populus. OB47(T) was unable to grow on mannitol, fucose, lignin, Gelrite, acetate, glycerol, ribose, sorbitol, carboxymethylcellulose, and casein. Yeast extract stimulated growth, and thiosulfate, sulfate, nitrate, and sulfur were not reduced. Fermentation end products were mainly acetate, H2, and CO2, although lactate and ethanol were produced in 5-liter batch fermentations. The G+C content of the DNA was 35 mol%, and sequence analysis of the small subunit rRNA gene placed OB47(T) within the genus Caldicellulosiruptor. Based on its phylogenetic and phenotypic properties, the isolate is proposed to be designated Caldicellulosiruptor obsidiansis sp. nov. and OB47 is the type strain (ATCC BAA-2073).</AbstractText>
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<ForeName>Scott D</ForeName>
<Initials>SD</Initials>
<AffiliationInfo><Affiliation>Biosciences Division, Oak Ridge National Laboratory, P.O. Box 2008 MS6038, Oak Ridge, TN 37831, USA.</Affiliation>
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<ForeName>Jennifer J</ForeName>
<Initials>JJ</Initials>
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<Author ValidYN="Y"><LastName>Vishnivetskaya</LastName>
<ForeName>Tatiana</ForeName>
<Initials>T</Initials>
</Author>
<Author ValidYN="Y"><LastName>Podar</LastName>
<ForeName>Mircea</ForeName>
<Initials>M</Initials>
</Author>
<Author ValidYN="Y"><LastName>Carroll</LastName>
<ForeName>Sue</ForeName>
<Initials>S</Initials>
</Author>
<Author ValidYN="Y"><LastName>Allman</LastName>
<ForeName>Steve</ForeName>
<Initials>S</Initials>
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<ForeName>Tommy J</ForeName>
<Initials>TJ</Initials>
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<ForeName>Martin</ForeName>
<Initials>M</Initials>
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<Initials>JG</Initials>
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Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park.

Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park.

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